STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Helz2Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
ENSONIP00000051099
annotation not available
 
   
 0.928
exosc7
Exosome component 7.
   
 0.912
Exosc1
Exosome component 1.
   
 0.908
exosc9
Exosome component 9.
   
 0.902
exosc8
Exosome component 8.
   
 0.902
exosc10
Exosome component 10.
   
 0.901
exosc5
Exosome component 5.
   
 0.899
mtrex
Mtr4 exosome RNA helicase.
   
 0.895
exosc2
Exosome component 2.
   
 0.892
exosc3
Exosome component 3.
   
 0.892
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.