Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Helz2Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
ENSONIP00000051099
annotation not available
 
   
 0.928
mtrex
Mtr4 exosome RNA helicase.
   
 0.893
exosc8
Exosome component 8.
   
 0.882
exosc10
Exosome component 10.
   
 0.880
exosc5
Exosome component 5.
   
 0.876
exosc7
Exosome component 7.
   
 0.875
Exosc1
Exosome component 1.
   
 0.869
exosc9
Exosome component 9.
   
 0.866
xrn1
5'-3' exoribonuclease 1.
   
 0.864
exosc3
Exosome component 3.
   
 0.861
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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