Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100711837Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
cenpp
Centromere protein P.
   
 0.999
cenpn
Centromere protein N.
   
 0.997
cenpm
Proliferation associated nuclear element.
    
 0.997
cenpk
Centromere protein K.
   
 0.994
cenpi
Centromere protein I.
   
 0.988
LOC100704432
Centromere protein S.
   
 0.929
LOC100698045
Somatostatin-1B.
   
 0.929
mei4
Meiosis-specific, MEI4 homolog (S. cerevisiae).
      
 0.923
mis18a
MIS18 kinetochore protein A.
   
 
 0.898
I3K3Z5_ORENI
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.877
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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