STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itfg1Integrin alpha FG-GAP repeat containing 1. (591 aa)    
Predicted Functional Partners:
phkb
Phosphorylase b kinase regulatory subunit beta isoform X2.
   
  
 0.738
LOC100707395
Suppressor of glucose, autophagy associated 1.
      
 0.584
pomp
Proteasome maturation protein.
      
 0.576
rabac1
PRA1 family protein.
      
 0.512
SNX14
Sorting nexin 14.
   
  
 0.509
LOC100710242
Sorting nexin 14.
   
  
 0.509
erp27
Uncharacterized protein.
   
 
 0.509
I3KHL2_ORENI
A kinase (PRKA) anchor protein 11.
      
 0.488
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
      
 0.473
Akap13
Si:dkey-172h23.2.
      
 0.470
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.