STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3J513_ORENIUBIQUITIN_CONJUGAT_2 domain-containing protein. (200 aa)    
Predicted Functional Partners:
ENSONIP00000047919
Ubiquitin B.
   
 0.956
rps27a
Ribosomal protein S27a.
   
 0.951
LOC100712348
Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.948
LOC100699741
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.948
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.940
hltf
Helicase-like transcription factor.
    
 0.923
Birc6
Baculoviral IAP repeat containing 6.
   
 0.874
Ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.845
Ube2s
Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.833
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.825
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.