STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkbh5AlkB homolog 5, RNA demethylase. (357 aa)    
Predicted Functional Partners:
fto
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.887
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
  
 0.708
wtap
WT1 associated protein.
   
  
 0.703
ythdf2
YTH N(6)-methyladenosine RNA binding protein 2.
      
 0.690
ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
      
 0.685
YTHDC2
YTH domain containing 2.
     
 0.684
alkbh1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.683
ythdc1
YTH domain containing 1.
      
 0.675
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
   
  
 0.600
zc3h13
Zinc finger CCCH-type containing 13.
      
 0.592
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.