Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC100695369Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (162 aa)    
Predicted Functional Partners:
kcnk6
Potassium channel subfamily K member.
      
 0.740
crebl2
cAMP responsive element binding protein-like 2.
      
 0.730
slc41a2
Solute carrier family 41 member 2b.
      
 0.730
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 
 0.704
LOC100699462
Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.
     
 0.604
Stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 
 0.600
Ctdnep1
CTD nuclear envelope phosphatase 1b.
      
 0.586
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
 
 0.581
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.576
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.574
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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