Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC102078972Si:ch211-186j3.6; Cadherins are calcium-dependent cell adhesion proteins. (2961 aa)    
Predicted Functional Partners:
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.782
ctnna1
Catenin (cadherin-associated protein), alpha 1.
   
 0.782
LOC102082890
Uncharacterized protein LOC102082890 isoform X1.
   
 0.782
LOC102081275
Cadherin-related family member 5b.
   
0.742
LOC102082062
Cadherin-related family member 5.
   
0.742
I3KHV6_ORENI
Uncharacterized protein.
   
0.742
LOC100707214
Junction plakoglobin a.
    
 0.736
LOC100701331
Uncharacterized protein.
    
 0.736
LOC100693960
Uncharacterized protein.
    
 0.736
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.736
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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