STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdac11Histone deacetylase 11. (367 aa)    
Predicted Functional Partners:
I3JV04_ORENI
Translocase of outer mitochondrial membrane 20.
    
 0.861
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.861
ENSONIP00000079948
Uncharacterized protein LOC109194435 isoform X1.
    
 0.796
ncor2
Nuclear receptor corepressor 2.
    
 0.696
ncor1
Nuclear receptor corepressor 1.
    
 0.696
LOC100700997
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
   
 0.692
LOC100698988
E1A binding protein p300 a.
    
 0.685
sin3a
SIN3 transcription regulator family member Aa.
   
 0.659
sin3b
SIN3 transcription regulator family member B.
   
 0.659
LOC100694434
SIN3 transcription regulator family member Ab.
   
 0.659
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.