STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100708437VWFA domain-containing protein; Belongs to the integrin alpha chain family. (1216 aa)    
Predicted Functional Partners:
ENSONIP00000034338
Integrin beta 2.
   
 0.928
LOC100703476
Integrin beta.
   
 0.928
I3JD82_ORENI
F11 receptor, tandem duplicate 1.
     
 0.927
cd226
CD226 molecule.
     
 0.905
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.711
LOC100692535
Integrin beta; Belongs to the integrin beta chain family.
   
 0.711
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
     
 0.700
LOC100696389
Uncharacterized protein.
     
 0.700
LOC100705099
CRK proto-oncogene, adaptor protein.
     
 0.700
SRC
Tyrosine-protein kinase.
   
  0.678
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.