STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CIB2Calcium and integrin binding family member 2. (187 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.793
TMC2
Transmembrane channel-like protein.
    
 0.746
Tmc3
Transmembrane channel-like protein.
    
 0.746
nin
Thyroid receptor-interacting protein 11-like.
    
 0.664
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
     
 0.658
trip13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
    
 0.648
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.616
htr5a
5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate b.
     
 0.616
LOC100705237
Carbonic anhydrase XVI b.
    
 
 0.603
lum
Lumican.
    
 0.589
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.