STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB2Calcium and integrin binding family member 2. (187 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.773
TMC2
Transmembrane channel-like protein.
    
 0.757
Tmc3
Transmembrane channel-like protein.
    
 0.757
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.703
LOC100693503
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.703
nin
Thyroid receptor-interacting protein 11-like.
    
 
 0.563
LOC102081483
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.538
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
     
 0.528
wdr90
WD repeat domain 90.
    
 0.515
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.510
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.