Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100709518Uncharacterized protein. (532 aa)    
Predicted Functional Partners:
LOC100708927
Amino acid transporter.
    
  0.564
I3J248_ORENI
Amino acid transporter.
    
  0.564
LOC100698754
Amino acid transporter.
    
  0.564
Slc3a1
Solute carrier family 3 member 1.
   
 
 0.513
LOC100701554
Solute carrier family 7 member 1a.
   
 
 0.446
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.423
slc38a9
Solute carrier family 38 member 9.
      
 0.409
Slc38a11
Solute carrier family 38 member 11.
      
 0.402
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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