Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100702935Suppressor of cytokine signaling 1b. (234 aa)    
Predicted Functional Partners:
socs2
Suppressor of cytokine signaling 2.
     
0.959
LOC100704232
Uncharacterized protein.
     
 
0.959
socs3
Suppressor of cytokine signaling 3.
     
 
0.959
socs4
Suppressor of cytokine signaling 4.
     
0.958
socs1
Uncharacterized protein.
  
  
 
0.938
LOC100697854
Tyrosine-protein kinase receptor.
    
  0.875
LOC100696191
Tyrosine-protein kinase receptor.
    
  0.875
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.688
LOC100707581
Tyrosine-protein kinase receptor.
    
  0.656
LOC100711993
Tyrosine-protein kinase receptor.
    
  0.656
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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