Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc81Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
LOC100708955
Sperm-associated antigen 8 isoform X4.
   
   0.775
ttl
Tubulin tyrosine ligase.
      
 0.687
efhb
Uncharacterized protein.
   
   0.626
Lg12h9orf116
UPF0691 protein C9orf116 homolog.
    
 
 0.619
ccdc146
Coiled-coil domain containing 146.
      
 0.618
LOC102079040
Coiled-coil domain containing 96.
      
 0.618
ccdc13
Coiled-coil domain containing 13.
      
 0.618
cep104
Centrosomal protein 104.
      
 0.617
cfap44
Uncharacterized protein.
   
  
 0.609
Mns1
Meiosis-specific nuclear structural 1.
   
   0.607
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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