STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR25WD repeat domain 25. (503 aa)    
Predicted Functional Partners:
slu7
SLU7 homolog, splicing factor.
   
 0.973
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.971
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.970
cwc25
CWC25 spliceosome associated protein homolog.
    
 0.963
Cwc22
MI domain-containing protein.
   
 0.961
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
   
 0.958
ENSONIP00000040643
CWF19 like cell cycle control factor 2.
   
 0.951
prpf18
PRP18 pre-mRNA processing factor 18 homolog (yeast).
   
 0.949
cwc27
CWC27 spliceosome associated cyclophilin.
    
 0.946
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.945
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.