STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710341Akirin 2. (184 aa)    
Predicted Functional Partners:
psma5
Proteasome subunit alpha type.
    
   0.829
psma1
Proteasome subunit alpha type.
    
   0.800
psma2
Proteasome subunit alpha type.
    
   0.766
PSMA4
Proteasome subunit alpha type.
    
   0.733
psmb2
Proteasome subunit beta.
    
   0.706
psmb3
Proteasome subunit beta.
    
   0.705
psma8
Proteasome subunit alpha type.
    
   0.554
akirin1
Akirin 1.
  
 
  
0.535
Psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.532
psmb1
Proteasome subunit beta.
    
   0.532
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.