Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
colec11Collectin sub-family member 11. (273 aa)    
Predicted Functional Partners:
LOC100711081
Collectin sub-family member 12.
  
 
0.887
COLEC12
Collectin subfamily member 12.
  
  
 
0.882
LOC100706759
Complement component 1, r subcomponent; Belongs to the peptidase S1 family.
    
 0.677
I3KKW9_ORENI
Mannan-binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
    
 0.677
LOC100711586
Complement component 1, s subcomponent.
    
 0.677
LOC112848257
Complement component 1, r subcomponent.
    
 0.677
Rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
 
      0.602
LOC100695895
Mannose receptor, C type 1a.
     
  0.601
ENSONIP00000047637
annotation not available
     
  0.601
I3JL79_ORENI
Uncharacterized protein.
     
  0.601
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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