Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccnyCyclin Y; Belongs to the cyclin family. (356 aa)    
Predicted Functional Partners:
LOC100710713
Cyclin-dependent kinase 15; Belongs to the protein kinase superfamily.
   
 
 0.576
I3JMG4_ORENI
Cyclin-dependent kinase 14; Belongs to the protein kinase superfamily.
   
 
 0.576
LOC100697880
Protein kinase domain-containing protein.
   
 
 0.513
LOC100701773
Cyclin-dependent kinase 16.
   
 
 0.513
I3K168_ORENI
Cyclin-dependent kinase 17; Belongs to the protein kinase superfamily.
   
 
 0.513
LOC100704872
Cyclin dependent kinase 17.
   
 
 0.513
CDK18
Cyclin dependent kinase 18; Belongs to the protein kinase superfamily.
   
 
 0.510
plekhm3
Pleckstrin homology domain containing, family M, member 3.
      
 0.492
manf
Mesencephalic astrocyte-derived neurotrophic factor.
      
 0.430
cdk5
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
      
 0.410
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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