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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsad2Radical S-adenosyl methionine domain containing 2. (354 aa)    
Predicted Functional Partners:
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
   
  
 0.959
LOC100709769
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.926
LOC100700930
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
  
 0.925
ifih1
Interferon induced with helicase C domain 1.
   
  
 0.896
dhx58
Probable ATP-dependent RNA helicase DHX58.
   
  
 0.854
LOC109194892
Interferon-induced protein 44-like.
   
  
 0.853
LOC100701136
TLDc domain-containing protein.
   
  
 0.853
LOC100710945
TLDc domain-containing protein.
   
  
 0.853
LOC100691607
Uncharacterized protein.
   
  
 0.835
I3JV01_ORENI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.835
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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