STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698246ANK_REP_REGION domain-containing protein. (1689 aa)    
Predicted Functional Partners:
LOC100705424
Rho family GTPase 1b.
    
 0.575
rnd1
Rho-related GTP-binding protein Rho6.
    
 0.575
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.539
LOC100696389
Uncharacterized protein.
    
 0.539
LOC100705099
CRK proto-oncogene, adaptor protein.
    
 0.539
I3KBX1_ORENI
Membrane associated guanylate kinase, WW and PDZ domain containing 2b.
    
   0.524
magi2
Membrane associated guanylate kinase, WW and PDZ domain containing 2a.
    
   0.524
rnd3
Rho family GTPase 3a.
    
 0.513
ift81
Intraflagellar transport 81 homolog.
    
 0.500
rap1b
Uncharacterized protein.
    
 0.479
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.