LOC100696746 protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC100696746

Anosmin 1a. (654 aa)

Predicted Functional Partners:

I3K441_ORENI

0.788

FGFR1

0.788

LOC100692465

0.777

fgfr3

0.777

Fgfr2

0.777

LOC100691488

0.764

LOC100707841

0.721

fgfrl1

0.643

ret

0.643

LOC100696824

0.643

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FGFR1	LOC100691488	ENSONIP00000054183	ENSONIP00000016574	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.971
FGFR1	LOC100696746	ENSONIP00000054183	ENSONIP00000004666	Fibroblast growth factor receptor.	Anosmin 1a.	0.788
FGFR1	LOC100707841	ENSONIP00000054183	ENSONIP00000067686	Fibroblast growth factor receptor.	Fibroblast growth factor receptor.	0.866
FGFR1	ret	ENSONIP00000054183	ENSONIP00000012975	Fibroblast growth factor receptor.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.665
Fgfr2	LOC100691488	ENSONIP00000060910	ENSONIP00000016574	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.988
Fgfr2	LOC100696746	ENSONIP00000060910	ENSONIP00000004666	Fibroblast growth factor receptor.	Anosmin 1a.	0.777
Fgfr2	LOC100707841	ENSONIP00000060910	ENSONIP00000067686	Fibroblast growth factor receptor.	Fibroblast growth factor receptor.	0.614
Fgfr2	ret	ENSONIP00000060910	ENSONIP00000012975	Fibroblast growth factor receptor.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.665
I3K441_ORENI	LOC100691488	ENSONIP00000015886	ENSONIP00000016574	Uncharacterized protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.971
I3K441_ORENI	LOC100696746	ENSONIP00000015886	ENSONIP00000004666	Uncharacterized protein.	Anosmin 1a.	0.788
I3K441_ORENI	LOC100707841	ENSONIP00000015886	ENSONIP00000067686	Uncharacterized protein.	Fibroblast growth factor receptor.	0.866
I3K441_ORENI	ret	ENSONIP00000015886	ENSONIP00000012975	Uncharacterized protein.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.665
LOC100691488	FGFR1	ENSONIP00000016574	ENSONIP00000054183	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.971
LOC100691488	Fgfr2	ENSONIP00000016574	ENSONIP00000060910	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.988
LOC100691488	I3K441_ORENI	ENSONIP00000016574	ENSONIP00000015886	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.971
LOC100691488	LOC100692465	ENSONIP00000016574	ENSONIP00000021843	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.966
LOC100691488	LOC100696746	ENSONIP00000016574	ENSONIP00000004666	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Anosmin 1a.	0.764
LOC100691488	LOC100696824	ENSONIP00000016574	ENSONIP00000050757	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.835
LOC100691488	LOC100707841	ENSONIP00000016574	ENSONIP00000067686	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.973
LOC100691488	fgfr3	ENSONIP00000016574	ENSONIP00000056914	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.966