Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lhx6LIM homeobox 6. (375 aa)    
Predicted Functional Partners:
LOC100694426
Folliculogenesis specific bHLH transcription factor.
   
 0.748
I3IYF2_ORENI
LIM domain binding 2a.
    
 0.671
I3JSU9_ORENI
LIM domain binding 1a.
    
 0.671
LOC100706951
LIM-domain binding 1b.
    
 0.671
dlx2
Distal-less homeobox 2b.
   
  
 0.621
barx1
BARX homeobox 1.
    
 0.607
I3IWX2_ORENI
Ectonucleoside triphosphate diphosphohydrolase 5b; Belongs to the GDA1/CD39 NTPase family.
   
  
 0.575
LOC100704637
Ectonucleoside triphosphate diphosphohydrolase 5a; Belongs to the GDA1/CD39 NTPase family.
   
  
 0.575
gata4
GATA binding protein 4.
   
 0.541
dlx1
Distal-less homeobox 1a.
   
  
 0.535
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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