lg14h19orf54 protein (Oreochromis niloticus)

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

lg14h19orf54

Zgc:153119. (298 aa)

Predicted Functional Partners:

lsm2

0.982

snrpd2

0.979

lsm5

0.978

lsm6

0.972

lsm7

0.967

lsm1

0.965

lsm4

0.964

Lsm8

0.964

snrpe

0.959

Snrpf

0.955

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lsm8	Snrpf	ENSONIP00000037306	ENSONIP00000068044	LSM8 homolog, U6 small nuclear RNA associated.	Small nuclear ribonucleoprotein F.	0.985
Lsm8	lg14h19orf54	ENSONIP00000037306	ENSONIP00000004739	LSM8 homolog, U6 small nuclear RNA associated.	Zgc:153119.	0.964
Lsm8	lsm1	ENSONIP00000037306	ENSONIP00000013555	LSM8 homolog, U6 small nuclear RNA associated.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.989
Lsm8	lsm2	ENSONIP00000037306	ENSONIP00000024321	LSM8 homolog, U6 small nuclear RNA associated.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
Lsm8	lsm4	ENSONIP00000037306	ENSONIP00000016014	LSM8 homolog, U6 small nuclear RNA associated.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
Lsm8	lsm5	ENSONIP00000037306	ENSONIP00000078376	LSM8 homolog, U6 small nuclear RNA associated.	U6 snRNA-associated Sm-like protein LSm5 isoform X1.	0.999
Lsm8	lsm6	ENSONIP00000037306	ENSONIP00000012582	LSM8 homolog, U6 small nuclear RNA associated.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
Lsm8	lsm7	ENSONIP00000037306	ENSONIP00000002255	LSM8 homolog, U6 small nuclear RNA associated.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
Lsm8	snrpd2	ENSONIP00000037306	ENSONIP00000054582	LSM8 homolog, U6 small nuclear RNA associated.	Small nuclear ribonucleoprotein Sm D2.	0.991
Lsm8	snrpe	ENSONIP00000037306	ENSONIP00000072391	LSM8 homolog, U6 small nuclear RNA associated.	Small nuclear ribonucleoprotein E.	0.979
Snrpf	Lsm8	ENSONIP00000068044	ENSONIP00000037306	Small nuclear ribonucleoprotein F.	LSM8 homolog, U6 small nuclear RNA associated.	0.985
Snrpf	lg14h19orf54	ENSONIP00000068044	ENSONIP00000004739	Small nuclear ribonucleoprotein F.	Zgc:153119.	0.955
Snrpf	lsm1	ENSONIP00000068044	ENSONIP00000013555	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.825
Snrpf	lsm2	ENSONIP00000068044	ENSONIP00000024321	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
Snrpf	lsm4	ENSONIP00000068044	ENSONIP00000016014	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.981
Snrpf	lsm5	ENSONIP00000068044	ENSONIP00000078376	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm5 isoform X1.	0.996
Snrpf	lsm6	ENSONIP00000068044	ENSONIP00000012582	Small nuclear ribonucleoprotein F.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.972
Snrpf	lsm7	ENSONIP00000068044	ENSONIP00000002255	Small nuclear ribonucleoprotein F.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.993
Snrpf	snrpd2	ENSONIP00000068044	ENSONIP00000054582	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein Sm D2.	0.999
Snrpf	snrpe	ENSONIP00000068044	ENSONIP00000072391	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein E.	0.999