ENSONIP00000004776 protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSONIP00000004776

annotation not available (985 aa)

Predicted Functional Partners:

RIMS2

0.951

I3KDW2_ORENI

0.951

rims3

0.779

I3J454_ORENI

0.779

RIMS1

0.779

Tspo

0.741

UNC13A

0.679

UNC13C

0.679

I3K991_ORENI

0.679

UNC13B

0.679

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000004776	I3J454_ORENI	ENSONIP00000004776	ENSONIP00000060057	annotation not available	Regulating synaptic membrane exocytosis 1a.	0.779
ENSONIP00000004776	I3K991_ORENI	ENSONIP00000004776	ENSONIP00000044149	annotation not available	Uncharacterized protein.	0.679
ENSONIP00000004776	I3KDW2_ORENI	ENSONIP00000004776	ENSONIP00000053808	annotation not available	Uncharacterized protein.	0.951
ENSONIP00000004776	RIMS1	ENSONIP00000004776	ENSONIP00000070492	annotation not available	Regulating synaptic membrane exocytosis 1.	0.779
ENSONIP00000004776	RIMS2	ENSONIP00000004776	ENSONIP00000000179	annotation not available	Regulating synaptic membrane exocytosis 2.	0.951
ENSONIP00000004776	Tspo	ENSONIP00000004776	ENSONIP00000081141	annotation not available	Translocator protein.	0.741
ENSONIP00000004776	UNC13A	ENSONIP00000004776	ENSONIP00000006080	annotation not available	Unc-13 homolog A.	0.679
ENSONIP00000004776	UNC13B	ENSONIP00000004776	ENSONIP00000067904	annotation not available	Unc-13 homolog B.	0.679
ENSONIP00000004776	UNC13C	ENSONIP00000004776	ENSONIP00000038846	annotation not available	Unc-13 homolog C.	0.679
ENSONIP00000004776	rims3	ENSONIP00000004776	ENSONIP00000005816	annotation not available	Regulating synaptic membrane exocytosis 3.	0.779
I3J454_ORENI	ENSONIP00000004776	ENSONIP00000060057	ENSONIP00000004776	Regulating synaptic membrane exocytosis 1a.	annotation not available	0.779
I3J454_ORENI	I3K991_ORENI	ENSONIP00000060057	ENSONIP00000044149	Regulating synaptic membrane exocytosis 1a.	Uncharacterized protein.	0.792
I3J454_ORENI	UNC13A	ENSONIP00000060057	ENSONIP00000006080	Regulating synaptic membrane exocytosis 1a.	Unc-13 homolog A.	0.792
I3J454_ORENI	UNC13B	ENSONIP00000060057	ENSONIP00000067904	Regulating synaptic membrane exocytosis 1a.	Unc-13 homolog B.	0.792
I3J454_ORENI	UNC13C	ENSONIP00000060057	ENSONIP00000038846	Regulating synaptic membrane exocytosis 1a.	Unc-13 homolog C.	0.792
I3K991_ORENI	ENSONIP00000004776	ENSONIP00000044149	ENSONIP00000004776	Uncharacterized protein.	annotation not available	0.679
I3K991_ORENI	I3J454_ORENI	ENSONIP00000044149	ENSONIP00000060057	Uncharacterized protein.	Regulating synaptic membrane exocytosis 1a.	0.792
I3K991_ORENI	I3KDW2_ORENI	ENSONIP00000044149	ENSONIP00000053808	Uncharacterized protein.	Uncharacterized protein.	0.966
I3K991_ORENI	RIMS1	ENSONIP00000044149	ENSONIP00000070492	Uncharacterized protein.	Regulating synaptic membrane exocytosis 1.	0.792
I3K991_ORENI	RIMS2	ENSONIP00000044149	ENSONIP00000000179	Uncharacterized protein.	Regulating synaptic membrane exocytosis 2.	0.966