Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eml3EMAP like 3. (1004 aa)    
Predicted Functional Partners:
LOC100692890
RAN binding protein 2.
   
 0.682
NEK9
NIMA related kinase 9.
   
 0.656
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.637
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.633
LOC100690943
Tyrosine-protein kinase receptor.
   
 0.619
alk
Tyrosine-protein kinase receptor.
   
 0.619
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.602
taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
 0.587
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.552
bub3
BUB3 mitotic checkpoint protein.
   
 0.550
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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