STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alx1ALX homeobox 1. (319 aa)    
Predicted Functional Partners:
MMD2
Monocyte to macrophage differentiation associated 2.
      
 0.562
LOC100706624
Ephrin-A5a; Belongs to the ephrin family.
    
 
 0.539
Hmga2
Uncharacterized protein.
      
 0.521
I3K0T5_ORENI
Metalloendopeptidase.
      
 0.514
LOC100698703
T-box transcription factor 5a.
    
 0.508
thbs3
Thrombospondin 3a.
   
 
 0.491
usp3
Ubiquitin carboxyl-terminal hydrolase.
      
 0.489
LOC100707199
AT rich interactive domain 3A (BRIGHT-like).
    
 
 0.485
ANGPTL2
Angiopoietin like 2.
      
 0.480
slc16a6
Solute carrier family 16 member 6a.
      
 0.480
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.