Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BFARBifunctional apoptosis regulator. (460 aa)    
Predicted Functional Partners:
pdxdc1
Pyridoxal-dependent decarboxylase domain containing 1.
      
 0.747
LOC100698862
CASP2 and RIPK1 domain containing adaptor with death domain.
      
 0.663
caap1
Caspase activity and apoptosis inhibitor 1.
      
 0.627
tp53bp1
Tumor protein p53 binding protein, 1.
    
 0.605
Birc6
Baculoviral IAP repeat containing 6.
   
 0.578
rps27a
Ribosomal protein S27a.
   
  0.567
nudcd1
NudC domain containing 1.
    
 
 0.567
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.550
nbn
Nibrin.
    
 0.524
lig3
DNA ligase.
      
 0.523
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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