Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697104Uncharacterized protein. (610 aa)    
Predicted Functional Partners:
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.
   
  0.939
LOC100694605
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
   
  0.939
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.871
LOC100692916
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
     
  0.851
I3JNW5_ORENI
Uncharacterized protein.
     
  0.851
I3KFD8_ORENI
Insulin-like growth factor 2 receptor.
    
 
 0.837
eprs1
Glutamyl-prolyl-tRNA synthetase.
     
  0.835
Sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 
 0.821
LOC100695509
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.801
Rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.801
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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