STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
poc1bPOC1 centriolar protein B. (525 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
   
 0.938
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.937
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.822
LOC100692647
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.816
setd1a
[histone H3]-lysine4 N-trimethyltransferase SETD1.
   
 0.816
LOC100700997
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
   
 0.776
kat2a
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
   
 0.776
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.760
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.759
Kansl1
KAT8 regulatory NSL complex subunit 1a.
    
 0.737
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.