Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC100701194Si:dkey-183j2.10; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (555 aa)    
Predicted Functional Partners:
LOC100708666
Syntaphilin.
   
  
 0.627
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.524
ccdc113
DUF4201 domain-containing protein.
   
 
 0.488
ENSONIP00000016918
Adenylate kinase 9.
    
   0.484
RNF207
Ring finger protein 207.
      
 0.480
LOC100711700
CD59 glycoprotein.
      
 0.449
cfap44
Uncharacterized protein.
    
   0.445
pacrg
PARK2 co-regulated.
    
   0.442
wdr90
WD repeat domain 90.
    
   0.426
ENSONIP00000020872
annotation not available
   
  
 0.416
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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