Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC102081275Cadherin-related family member 5b. (743 aa)    
Predicted Functional Partners:
Cdhr2
Uncharacterized protein.
  
0.943
Cdh23
Cadherin-related 23.
   
 0.871
ush1c
USH1 protein network component harmonin.
   
 
 0.858
cdh11
Cadherin 11, type 2, OB-cadherin (osteoblast); Cadherins are calcium-dependent cell adhesion proteins.
   
0.742
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
0.742
LOC102078972
Si:ch211-186j3.6; Cadherins are calcium-dependent cell adhesion proteins.
   
0.742
LOC100704934
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
0.742
dchs2
Uncharacterized protein.
   
0.742
CDH7
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
0.742
ENSONIP00000069058
annotation not available
   
0.742
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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