Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RASSF1Ras association domain family member 1. (365 aa)    
Predicted Functional Partners:
rassf5
Ras association domain family member 5.
    
 0.978
daxx
Death-domain associated protein.
    
 
 0.911
sav1
Salvador family WW domain containing protein 1.
    
 
 0.903
LOC100695319
Uncharacterized protein.
    
 0.899
stk3
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.899
mras
Muscle RAS oncogene homolog.
    
  0.856
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
    
 0.767
hras
HRas proto-oncogene, GTPase a.
    
 0.767
CSDE1
Cold shock domain containing E1, RNA-binding.
    
 0.767
LOC100703836
Zgc:55558.
    
 0.767
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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