STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abhd14bAbhydrolase domain containing 14B. (211 aa)    
Predicted Functional Partners:
LOC100705828
MOB kinase activator 3C.
      
 0.694
palb2
PALB2_WD40 domain-containing protein.
  
 0.611
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.611
tmem218
Transmembrane protein 218.
      
 0.581
mettl6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.570
ndufv3
NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial isoform X1.
      
 0.568
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.564
rerg
RAS like estrogen regulated growth inhibitor.
    
 
 0.542
hdhd2
Haloacid dehalogenase-like hydrolase domain containing 2.
  
  
 0.508
oxct1
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
  
 
 0.498
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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