STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100703725Tyrosine-protein kinase receptor. (827 aa)    
Predicted Functional Partners:
ntf3
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.886
LOC100692989
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
    
 0.794
bdnf
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
   
 0.777
LOC100702908
Protein tyrosine phosphatase receptor type Sa.
   
 0.688
I3JVL4_ORENI
Protein-tyrosine-phosphatase.
   
 0.688
LOC102081035
Neurotrophin 4; Belongs to the NGF-beta family.
    
 0.631
LOC100694711
Protein tyrosine phosphatase receptor type Fa.
    
0.605
PTPRF
Protein tyrosine phosphatase receptor type F.
    
0.605
PTPRD
Uncharacterized protein.
    
 0.605
ENSONIP00000073183
annotation not available
    
 0.605
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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