STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100704432Centromere protein S. (124 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
   
 0.999
faap24
FA core complex associated protein 24.
    
 0.978
fanca
Fanconi_A_N domain-containing protein.
    
 0.975
fancl
FA complementation group L.
    
 0.971
fancf
FA complementation group F.
    
 0.970
fancg
FA complementation group G.
    
 0.965
fancc
FA complementation group C.
    
 0.964
fancd2
FA complementation group D2.
     
 0.961
fanci
FA complementation group I.
     
 0.954
cenpx
Centromere protein X.
     
 0.953
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.