STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100711896Taste receptor, type 1, member 3. (854 aa)    
Predicted Functional Partners:
dvl1
Dishevelled segment polarity protein 1a.
      
 0.595
tas1r2
Taste receptor, type 1, member 1.
  
  
0.546
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 
 0.522
wdr90
WD repeat domain 90.
    
   0.516
LOC100694143
G_PROTEIN_RECEP_F3_4 domain-containing protein.
  
0.512
ENSONIP00000038839
LOW QUALITY PROTEIN: taste receptor type 1 member 1.
  
0.512
LOC100695648
G_PROTEIN_RECEP_F3_4 domain-containing protein.
  
0.512
ENSONIP00000046871
Taste receptor type 1 member 1-like.
  
0.507
ENSONIP00000040035
Taste receptor type 1 member 1-like.
  
0.506
zbtb48
Zinc finger and BTB domain containing 48.
      
 0.502
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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