STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napaN-ethylmaleimide-sensitive factor attachment protein, alpha b. (307 aa)    
Predicted Functional Partners:
Vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.959
scfd1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.944
Stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.941
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
 0.933
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.928
LOC100697603
N-ethylmaleimide-sensitive factor a.
   
 0.893
LOC100706831
N-ethylmaleimide-sensitive factor b.
   
 0.893
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.889
LOC100691194
Vesicle-associated membrane protein 8.
    
 0.887
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.886
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.