STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100689838Anthrax toxin receptor; Belongs to the ATR family. (413 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.759
LOC100692890
RAN binding protein 2.
    
 0.521
LOC100696250
Leucine rich repeat and fibronectin type III domain containing 5b.
    
 0.485
lrfn5
Leucine rich repeat and fibronectin type III domain containing 5a.
    
 0.485
dkk2
Dickkopf WNT signaling pathway inhibitor 2.
  
  
 0.474
lrrc2
Uncharacterized protein.
    
 0.473
Lrrc39
Leucine rich repeat containing 39.
    
 0.473
HDGFL3
Hepatoma-derived growth factor-related protein 3.
    
 
 0.448
rbbp5
Retinoblastoma binding protein 5.
    
 0.445
LOC100699690
Uncharacterized protein.
      
 0.441
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.