Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3J8E6_ORENIUncharacterized protein. (2222 aa)    
Predicted Functional Partners:
grip1
Glutamate receptor interacting protein 1.
    
 0.768
COL6A6
Uncharacterized protein.
      
 0.569
dcn
Decorin; May affect the rate of fibrils formation.
     
 0.499
csgalnact2
Hexosyltransferase.
     
 0.479
Chst11
Carbohydrate sulfotransferase.
     
 0.479
LOC100696665
Proteolipid protein 1b.
      
 0.463
ENSONIP00000068708
Myelin proteolipid protein isoform X1.
      
 0.463
I3KEZ4_ORENI
Collagen, type VI, alpha 1.
   
  
 0.462
I3KII9_ORENI
Heparan sulfate proteoglycan 2.
   
 
 0.459
LOC100689882
Nectin cell adhesion molecule 3b.
   
  
 0.447
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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