Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3J8G3_ORENIAKAP2_C domain-containing protein. (720 aa)    
Predicted Functional Partners:
I3J8G5_ORENI
Uncharacterized protein.
 
      0.899
lrrc42
Leucine rich repeat containing 42.
      
 0.459
znf217
Zinc finger protein 217.
  
     0.432
LOC100704314
Zinc fingers and homeoboxes 3.
  
     0.427
ZBTB21
Zinc finger and BTB domain containing 21.
      
 0.410
zfpm1
Zinc finger protein, FOG family member 1.
      
 0.405
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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