Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hdhd2Haloacid dehalogenase-like hydrolase domain containing 2. (259 aa)    
Predicted Functional Partners:
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
     
 0.712
atp5f1c
ATP synthase subunit gamma.
   
 
 0.674
atp5f1d
ATP synthase F1 subunit delta.
   
 
 0.669
atp5po
ATP synthase peripheral stalk subunit OSCP.
   
 
 0.669
atp6v0b
ATPase H+ transporting V0 subunit b; Belongs to the V-ATPase proteolipid subunit family.
   
 
 0.663
ATP6
ATP synthase subunit a.
     
 0.652
abhd14b
Abhydrolase domain containing 14B.
    
 0.651
WDR70
WD repeat domain 70.
      
 0.639
tmem267
Transmembrane protein 267.
      
 0.628
ttc38
Tetratricopeptide repeat domain 38.
      
 0.625
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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