STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706118COesterase domain-containing protein. (872 aa)    
Predicted Functional Partners:
LOC100697588
Neurexin 1.
    
 0.948
LOC100711078
Uncharacterized protein.
   
 0.559
Mdga1
MAM domain containing glycosylphosphatidylinositol anchor 1.
   
 0.559
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
   
 0.559
utp20
UTP20 small subunit processome component.
   
 0.535
wdr43
WD repeat domain 43.
   
 0.532
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.518
LOC100710932
Uncharacterized protein.
    
 0.506
nrxn1
Neurexin 1.
    
 0.506
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.506
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.