STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696264Myosin, light chain 1, alkali; skeletal, fast. (193 aa)    
Predicted Functional Partners:
I3KK23_ORENI
Nebulin.
   
 
 0.962
LOC100709026
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.957
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.957
LOC100703845
Si:rp71-17i16.4.
  
0.944
LOC100710463
Uncharacterized protein.
   
0.936
LOC100708845
Uncharacterized protein.
   
0.936
LOC100697131
Myosin, light chain 9a, regulatory.
   
0.936
MYL7
Myosin regulatory light chain 2, atrial isoform.
   
 0.866
ENSONIP00000037558
Myosin regulatory light chain 2, atrial isoform.
   
 0.866
LOC100704512
Troponin I4b, tandem duplicate 1.
   
 0.851
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.