Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC100707131Glycolipid transfer protein domain containing 2. (305 aa)    
Predicted Functional Partners:
rpp21
Ribonuclease P 21 subunit.
      
 0.682
I3KZC6_ORENI
Apolipoprotein F.
   
  
 0.585
eif3a
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.522
eif1ad
Eukaryotic translation initiation factor 1A domain containing.
      
 0.512
Lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
      
 0.511
Apoc2
Apolipoprotein C-II.
      
 0.495
polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.456
LOC100709763
Ribosome binding protein 1a.
      
 0.446
isca2
Iron-sulfur cluster assembly 2.
      
 0.445
I3J2M6_ORENI
Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.
      
 0.441
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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