Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fat2FAT atypical cadherin 2. (4364 aa)    
Predicted Functional Partners:
Fjx1
Four-jointed box kinase 1.
   
 0.947
rere
Arginine-glutamic acid dipeptide (RE) repeats a.
    
 0.704
I3KAI9_ORENI
Arginine-glutamic acid dipeptide (RE) repeats b.
    
 0.704
Atn1
LOW QUALITY PROTEIN: atrophin-1.
    
 0.704
yap1
Yes-associated protein 1.
   
 
 0.683
I3JNJ6_ORENI
N-acetyltransferase domain-containing protein.
      
 0.678
I3K7X9_ORENI
Limb and CNS expressed 1.
   
 0.674
LIX1L
Limb and CNS expressed 1 like.
   
 0.674
lats2
Large tumor suppressor kinase 2.
    
 
 0.657
CSNK1D
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
 0.646
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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