STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfi1SFI1 centrin binding protein. (1126 aa)    
Predicted Functional Partners:
cetn3
Centrin 3.
    
 
 0.880
LOC100695822
Centrin 4.
    
 
 0.837
LOC100689752
Centrin, EF-hand protein, 2.
    
 
 0.837
crppa
CDP-L-ribitol pyrophosphorylase A.
    
 
 0.836
plk3
Serine/threonine-protein kinase PLK.
    
 0.712
plk2
Serine/threonine-protein kinase PLK.
    
 0.712
plk1
Serine/threonine-protein kinase PLK.
    
 0.712
sec63
SEC63 homolog, protein translocation regulator.
      
 0.687
plk4
Polo-like kinase 4 (Drosophila).
    
 0.681
rbks
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
      
 0.629
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.