Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GCC2GRIP and coiled-coil domain containing 2. (1665 aa)    
Predicted Functional Partners:
LOC100697336
RAB9B, member RAS oncogene family.
    
 0.938
RAB9A
RAB9A, member RAS oncogene family.
    
 0.938
LOC100700420
Uncharacterized protein.
    
 0.938
I3IV58_ORENI
Syntaxin 10.
     
 0.929
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.913
gcc1
GRIP and coiled-coil domain containing 1.
     
0.904
nup153
Nucleoporin 153.
   
 0.868
nup155
Nucleoporin 155.
   
 0.863
I3JA42_ORENI
Syntaxin 6; Belongs to the syntaxin family.
     
 0.862
grip1
Glutamate receptor interacting protein 1.
      
 0.860
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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