STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCC2GRIP and coiled-coil domain containing 2. (1665 aa)    
Predicted Functional Partners:
LOC100697336
RAB9B, member RAS oncogene family.
     
 0.951
RAB9A
RAB9A, member RAS oncogene family.
     
 0.951
LOC100700420
Uncharacterized protein.
     
 0.951
NUP54
Nucleoporin 54.
   
 0.901
nup155
Nucleoporin 155.
   
 0.898
nup153
Nucleoporin 153.
   
 0.872
NUP214
Nucleoporin 214.
   
 0.871
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.870
nup88
Nucleoporin 88.
    
 0.864
nup133
Nucleoporin 133.
   
 0.864
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.