Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSC22D1Uncharacterized protein. (892 aa)    
Predicted Functional Partners:
LOC100693161
TSC22 domain family protein 1.
 
      0.875
sgk2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.595
SGK1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.595
LOC100690652
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.595
I3JW49_ORENI
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.582
braf
B-Raf proto-oncogene serine/threonine-protein kinase.
    
 0.582
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
 0.582
TSC22D2
TSC22 domain family protein 2 isoform X3.
   
 
 0.571
I3JX81_ORENI
Uncharacterized protein.
   
 
 0.571
LOC100706521
Nuclear receptor binding protein 2b.
    
 
 0.560
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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