Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710886Rho GTPase activating protein 35b. (1529 aa)    
Predicted Functional Partners:
I3K382_ORENI
Uncharacterized protein.
    
 0.947
SRC
Tyrosine-protein kinase.
    
 0.930
LOC100692677
Tyrosine-protein kinase.
    
 0.930
arhgap5
Rho GTPase activating protein 5.
     
  0.916
arhgap35
Uncharacterized protein.
     
  0.916
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
 0.896
LOC100694803
Ras homolog family member Cb.
    
 0.758
LOC100693083
Uncharacterized protein.
    
 0.758
LOC100710477
Ras homolog gene family, member Ab.
    
 0.758
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.758
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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