STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710886Rho GTPase activating protein 35b. (1529 aa)    
Predicted Functional Partners:
LOC100694803
Ras homolog family member Cb.
    
 0.963
LOC100710477
Ras homolog gene family, member Ab.
    
 0.963
LOC100707445
Uncharacterized protein.
    
 0.963
LOC100698785
Uncharacterized protein.
    
 0.963
SRC
Tyrosine-protein kinase.
    
 0.932
LOC100692677
Tyrosine-protein kinase.
    
 0.932
arhgap5
Rho GTPase activating protein 5.
  
  
 
0.902
arhgap35
Uncharacterized protein.
  
  
 
0.901
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.890
rnd3
Rho family GTPase 3a.
    
 0.655
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.