Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Thsd7bThrombospondin, type I, domain containing 7Ba. (1643 aa)    
Predicted Functional Partners:
LOC100705049
C1q and TNF related 6a.
   
  
 0.648
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.628
plce1
Phospholipase C, epsilon 1.
      
 0.598
sbspon
Somatomedin B and thrombospondin type 1 domain containing.
     
 0.582
LOC100691072
Peptidoglycan-recognition protein SC2.
      
 0.575
plekhg5
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
      
 0.554
kcnh4
Potassium voltage-gated channel, subfamily H (eag-related), member 4a.
      
 0.552
gramd1b
GRAM domain containing 1Bb.
      
 0.550
tlk1
Tousled-like kinase 1a.
      
 0.512
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
 0.509
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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