Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000005565Matrin 3-like 1.1. (872 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.730
LOC100706673
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.730
LOC100703628
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.639
nono
Non-POU domain containing, octamer-binding.
   
 
 0.590
pspc1
Paraspeckle component 1.
   
 
 0.576
I3J012_ORENI
Heterogeneous nuclear ribonucleoprotein M.
   
 0.573
I3KAX8_ORENI
Ataxin 2.
    
 
 0.559
Tardbp
TAR DNA binding protein, like.
   
 0.546
LOC100704166
TAR DNA binding protein.
   
 0.546
I3K6S2_ORENI
EWS RNA-binding protein 1b.
   
 
 0.525
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.